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1

Hyperparameters and tuning strategies for random forest

Probst, Philipp, Wright, Marvin N., Boulesteix, Anne-Laure

Journal:

Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery

Year:

2019

Language:

english

File:

PDF, 1.71 MB

english, 2019

2

Conditional variable importance for random forests

Carolin Strobl, Anne-Laure Boulesteix, Thomas Kneib, Thomas Augustin, Achim Zeileis

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 387 KB

english, 2008

3

Bias in random forest variable importance measures: Illustrations, sources and a solution

Carolin Strobl, Anne-Laure Boulesteix, Achim Zeileis, Torsten Hothorn

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 360 KB

english, 2007

4

Unbiased split selection for classification trees based on the Gini Index

Carolin Strobl, Anne-Laure Boulesteix, Thomas Augustin

Journal:

Computational Statistics & Data Analysis

Year:

2007

Language:

english

File:

PDF, 267 KB

english, 2007

5

Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics

Boulesteix, Anne-Laure, Janitza, Silke, Kruppa, Jochen, König, Inke R.

Journal:

Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery

Year:

2012

Language:

english

File:

PDF, 335 KB

english, 2012

6

Maximally Selected Chi-square Statistics for Ordinal Variables

Anne-Laure Boulesteix

Journal:

Biometrical Journal

Year:

2006

Language:

english

File:

PDF, 127 KB

english, 2006

7

Maximally Selected Chi-Square Statistics and Binary Splits of Nominal Variables

Anne-Laure Boulesteix

Journal:

Biometrical Journal

Year:

2006

Language:

english

File:

PDF, 137 KB

english, 2006

8

Maximally selected Chi-squared statistics and non-monotonic associations: An exact approach based on two cutpoints

Anne-Laure Boulesteix, Carolin Strobl

Journal:

Computational Statistics & Data Analysis

Year:

2007

Language:

english

File:

PDF, 202 KB

english, 2007

9

Survival prediction using gene expression data: A review and comparison

Wessel N. van Wieringen, David Kun, Regina Hampel, Anne-Laure Boulesteix

Journal:

Computational Statistics & Data Analysis

Year:

2009

Language:

english

File:

PDF, 1.18 MB

english, 2009

10

Surgery for asymptomatic pilonidal sinus disease

Dietrich Doll, Jan Friederichs, Anne-Laure Boulesteix, Wolfgang Düsel, Falko Fend, Sven Petersen

Journal:

International Journal of Colorectal Disease

Year:

2008

Language:

english

File:

PDF, 38 KB

english, 2008

11

Random forest for ordinal responses: Prediction and variable selection

Janitza, Silke, Tutz, Gerhard, Boulesteix, Anne-Laure

Journal:

Computational Statistics & Data Analysis

Year:

2016

Language:

english

File:

PDF, 657 KB

english, 2016

12

Pitfalls of hypothesis tests and model selection on bootstrap samples: Causes and consequences in biometrical applications

Janitza, Silke, Binder, Harald, Boulesteix, Anne-Laure

Journal:

Biometrical Journal

Year:

2016

Language:

english

File:

PDF, 633 KB

english, 2016

13

A computationally fast variable importance test for random forests for high-dimensional data

Janitza, Silke, Celik, Ender, Boulesteix, Anne-Laure

Journal:

Advances in Data Analysis and Classification

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

14

Guest Editorial—Special Collection Topic: Statistical Systems Theory in Cancer Modeling, Diagnosis, and Therapy

Dougherty, Edward R, Boulesteix, Anne-Laure, Dalton, Lori A, Zhang, Michelle

Journal:

Cancer Informatics

Year:

2018

Language:

english

File:

PDF, 117 KB

english, 2018

15

Random forest versus logistic regression: a large-scale benchmark experiment

Couronné, Raphael, Probst, Philipp, Boulesteix, Anne-Laure

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.34 MB

english, 2018

16

Outcome of patients treated with extracorporeal life support in cardiogenic shock complicating acute myocardial infarction: 1-year result from the ECLS-Shock study

Lackermair, Korbinian, Brunner, Stefan, Orban, Mathias, Peterss, Sven, Orban, Martin, Theiss, Hans D., Huber, Bruno C., Juchem, Gerd, Born, Frank, Boulesteix, Anne-Laure, Bauer, Axel, Pichlmaier, Maxi

Journal:

Clinical Research in Cardiology

Year:

2020

File:

PDF, 667 KB

2020

17

Use of pretransformation to cope with extreme values in important candidate features

Anne-Laure Boulesteix, Vincent Guillemot, Willi Sauerbrei

Journal:

Biometrical Journal

Year:

2011

Language:

english

File:

PDF, 259 KB

english, 2011

18

Penalized Partial Least Squares with applications to B-spline transformations and functional data

Nicole Krämer, Anne-Laure Boulesteix, Gerhard Tutz

Journal:

Chemometrics and Intelligent Laboratory Systems

Year:

2008

Language:

english

File:

PDF, 845 KB

english, 2008

19

Identification of interaction patterns and classification with applications to microarray data

Anne-Laure Boulesteix, Gerhard Tutz

Journal:

Computational Statistics & Data Analysis

Year:

2006

Language:

english

File:

PDF, 295 KB

english, 2006

20

Inhibition of radiation induced migration of human head and neck squamous cell carcinoma cells by blocking of EGF receptor pathways

Anja C Pickhard, Johanna Margraf, Andreas Knopf, Thomas Stark, Guido Piontek, Carolin Beck, Anne-Laure Boulesteix, Elias Q Scherer, Steffi Pigorsch, Jürgen Schlegel, Wolfgang Arnold, Rudolf Reiter

Journal:

Year:

2011

Language:

english

File:

PDF, 571 KB

english, 2011

21

Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approach

Anne-Laure Boulesteix, Korbinian Strimmer

Journal:

Theoretical Biology and Medical Modelling

Year:

2005

Language:

english

File:

PDF, 297 KB

english, 2005

22

Methylene Blue halves the long-term recurrence rate in acute pilonidal sinus disease

Dietrich Doll, Alexander Novotny, Ronny Rothe, Jette Elisabeth Kristiansen, Kai Wietelmann, Anne-Laure Boulesteix, Wolfgang Düsel, Sven Petersen

Journal:

International Journal of Colorectal Disease

Year:

2008

Language:

english

File:

PDF, 153 KB

english, 2008

23

Time and rate of sinus formation in pilonidal sinus disease

Dietrich Doll, Jan Friederichs, Heidi Dettmann, Anne-Laure Boulesteix, Wolfgang Duesel, Sven Petersen

Journal:

International Journal of Colorectal Disease

Year:

2008

Language:

english

File:

PDF, 142 KB

english, 2008

24

Differential expression of the chemokines GRO-2, GRO-3, and interleukin-8 in colon cancer and their impact on metastatic disease and survival

Dietrich Doll, Larissa Keller, Matthias Maak, Anne-Laure Boulesteix, Jörg R. Siewert, Bernhard Holzmann, Klaus-Peter Janssen

Journal:

International Journal of Colorectal Disease

Year:

2010

Language:

english

File:

PDF, 219 KB

english, 2010

25

Comments on: Augmenting the bootstrap to analyze high dimensional genomic data

Anne-Laure Boulesteix, Athanassios Kondylis, Nicole Krämer

Journal:

Year:

2008

Language:

english

File:

PDF, 175 KB

english, 2008

26

AUC-RF: A New Strategy for Genomic Profiling with Random Forest

Calle, M. Luz, Urrea, Victor, Boulesteix, Anne-Laure, Malats, Nuria

Journal:

Year:

2011

Language:

english

File:

PDF, 645 KB

english, 2011

27

Influence of diatoms on copepod reproduction. II. Uncorrelated effects of diatom-derived α,β,γ,δ-unsaturated aldehydes and polyunsaturated fatty acids on Calanus helgolandicus in the field

Thomas Wichard, Serge A. Poulet, Anne-Laure Boulesteix, Jean Baptiste Ledoux, Benoit Lebreton, Julie Marchetti, Georg Pohnert

Journal:

Progress in Oceanography

Year:

2008

Language:

english

File:

PDF, 676 KB

english, 2008

28

Regularized estimation of large-scale gene association networks using graphical Gaussian models

Nicole Krämer, Juliane Schäfer, Anne-Laure Boulesteix

Journal:

BMC Bioinformatics

Year:

2009

Language:

english

File:

PDF, 526 KB

english, 2009

29

Testing the additional predictive value of high-dimensional molecular data

Anne-Laure Boulesteix, Torsten Hothorn

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 417 KB

english, 2010

30

Optimal classifier selection and negative bias in error rate estimation: an empirical study on high-dimensional prediction

Anne-Laure Boulesteix, Carolin Strobl

Journal:

BMC Medical Research Methodology

Year:

2009

Language:

english

File:

PDF, 369 KB

english, 2009

31

An AUC-based permutation variable importance measure for random forests

Silke Janitza, Carolin Strobl, Anne-Laure Boulesteix

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 225 KB

english, 2013

32

Correcting the Optimal Resampling-Based Error Rate by Estimating the Error Rate of Wrapper Algorithms

Bernau, Christoph, Augustin, Thomas, Boulesteix, Anne-Laure

Journal:

Year:

2013

Language:

english

File:

PDF, 271 KB

english, 2013

33

Machine learning versus statistical modeling

Boulesteix, Anne-Laure, Schmid, Matthias

Journal:

Biometrical Journal

Year:

2014

Language:

english

File:

PDF, 61 KB

english, 2014

34

On stability issues in deriving multivariable regression models

Sauerbrei, Willi, Buchholz, Anika, Boulesteix, Anne-Laure, Binder, Harald

Journal:

Biometrical Journal

Year:

2015

Language:

english

File:

PDF, 1.66 MB

english, 2015

35

Stability Investigations of Multivariable Regression Models Derived from Low- and High-Dimensional Data

Sauerbrei, Willi, Boulesteix, Anne-Laure, Binder, Harald

Journal:

Journal of Biopharmaceutical Statistics

Year:

2011

Language:

english

File:

PDF, 666 KB

english, 2011

36

Investigating the prediction ability of survival models based on both clinical and omics data: two case studies

De Bin, Riccardo, Sauerbrei, Willi, Boulesteix, Anne-Laure

Journal:

Statistics in Medicine

Year:

2014

Language:

english

File:

PDF, 3.88 MB

english, 2014

37

Added predictive value of omics data: specific issues related to validation illustrated by two case studies

Bin, Riccardo, Herold, Tobias, Boulesteix, Anne-Laure

Journal:

BMC Medical Research Methodology

Year:

2014

Language:

english

File:

PDF, 890 KB

english, 2014

38

Breath isoprene concentrations in persons undergoing general anesthesia and in healthy volunteers

Hornuss, Cyrill, Zagler, Armin, Dolch, Michael E, Wiepcke, Dirk, Praun, Siegfried, Boulesteix, Anne-Laure, Weis, Florian, Apfel, Christian C, Schelling, Gustav

Journal:

Journal of Breath Research

Year:

2012

Language:

english

File:

PDF, 352 KB

english, 2012

39

Reader's Reaction to "Dimension Reduction for Classification with Gene Expression Microarray Data" by Dai et al (2006)

Boulesteix, Anne-Laure

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2006

Language:

english

File:

PDF, 151 KB

english, 2006

40

Ten Simple Rules for Reducing Overoptimistic Reporting in Methodological Computational Research

Boulesteix, Anne-Laure, Lewitter, Fran

Journal:

PLoS Computational Biology

Year:

2015

Language:

english

File:

PDF, 103 KB

english, 2015

41

Centrosome abnormalities in head and neck squamous cell carcinoma (HNSCC)

Reiter, Rudolf, Gais, Peter, Steuer-Vogt, Miriam K., Boulesteix, Anne-Laure, Deutschle, Tom, Hampel, Regina, Wagenpfeil, Stefan, Rauser, Sandra, Walch, Axel, Bink, Karin, Jütting, Uta, Neff, Frauke, A

Journal:

Acta Oto-Laryngologica

Year:

2009

Language:

english

File:

PDF, 185 KB

english, 2009

42

A Statistical Framework for Hypothesis Testing in Real Data Comparison Studies

Boulesteix, Anne-Laure, Hable, Robert, Lauer, Sabine, Eugster, Manuel J. A.

Journal:

The American Statistician

Year:

2015

Language:

english

File:

PDF, 664 KB

english, 2015

43

Gender mismatch in allograft aortic valve surgery

Böll, Bernhard Michael, Vogt, Ferdinand, Boulesteix, Anne Laure, Schmitz, Christoph

Journal:

Interactive Cardiovascular and Thoracic Surgery

Year:

2015

Language:

english

File:

PDF, 282 KB

english, 2015

44

A Large Homozygous or Heterozygous In-Frame Deletion within the Calcium-Sensing Receptor’s Carboxylterminal Cytoplasmic Tail That Causes Autosomal Dominant Hypocalcemia 1

Lienhardt, Anne, Garabédian, Michèle, Bai, Mei, Sinding, Christiane, Zhang, Zaixiang, Lagarde, Jean-Pierre, Boulesteix, Jean, Rigaud, Michel, Brown, Edward M., Kottler, Marie-Laure

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2000

Language:

english

File:

PDF, 898 KB

english, 2000

45

Improved prediction of complex diseases by common genetic markers: state of the art and further perspectives

Müller, Bent, Wilcke, Arndt, Boulesteix, Anne-Laure, Brauer, Jens, Passarge, Eberhard, Boltze, Johannes, Kirsten, Holger

Journal:

Year:

2016

Language:

english

File:

PDF, 893 KB

english, 2016

46

A measure of the impact of CV incompleteness on prediction error estimation with application to PCA and normalization

Hornung, Roman, Bernau, Christoph, Truntzer, Caroline, Wilson, Rory, Stadler, Thomas, Boulesteix, Anne-Laure

Journal:

BMC Medical Research Methodology

Year:

2015

Language:

english

File:

PDF, 687 KB

english, 2015

47

Gram-negative and -positive bacteria differentiation in blood culture samples by headspace volatile compound analysis

Dolch, Michael E., Janitza, Silke, Boulesteix, Anne-Laure, Graßmann-Lichtenauer, Carola, Praun, Siegfried, Denzer, Wolfgang, Schelling, Gustav, Schubert, Sören

Journal:

Journal of Biological Research-Thessaloniki

Year:

2016

Language:

english

File:

PDF, 983 KB

english, 2016

48

Combining location-and-scale batch effect adjustment with data cleaning by latent factor adjustment

Hornung, Roman, Boulesteix, Anne-Laure, Causeur, David

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 832 KB

english, 2016

49

Live music reduces stress levels in very low-birthweight infants

Schwilling, Diana, Vogeser, Michael, Kirchhoff, Fabian, Schwaiblmair, Frauke, Boulesteix, Anne-Laure, Schulze, Andreas, Flemmer, Andreas W.

Journal:

Acta Paediatrica

Year:

2015

Language:

english

File:

PDF, 293 KB

english, 2015

50

The residual-based predictiveness curve: A visual tool to assess the performance of prediction models

Casalicchio, Giuseppe, Bischl, Bernd, Boulesteix, Anne-Laure, Schmid, Matthias

Journal:

Year:

2016

Language:

english

File:

PDF, 1.50 MB

english, 2016

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